Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567916: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318288' containing sample 'VET0091R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6M spots, 1.2G bases, 610Mb downloads

UUID: 4dcd8f24-6d89-4ef4-addc-07395fee0e2a

Design: Illumina sequencing of Staphylococcus aureus VET0091R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228514 • SRP042928 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0091R

SAMN02404007 • SRS627043 • All experiments • All runs

Organism: Staphylococcus aureus VET0091R

Library:

Name: Pond-318288

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 469921.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8NR

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55049

research_project: RP-513

root_sample_id: SM-4P92S

sample_id: SM-5C8NR

work_request: 39365

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6M spots, 1.2G bases, 610Mb

Run	# of Spots	# of Bases	Size	Published
SRR1330369	3,061,880	618.5M	311Mb	2014-06-04
SRR1330414	2,968,833	599.7M	299Mb	2014-06-04

ID:: 810768

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